[Strategy Market] Cytosine Ratio

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  • Idea
  • Updated 8 years ago
If an RNA has the same number of Cytosines as Guanines, consider it be neutral. If an RNA has fewer Cytosines than Guanines, reward it up to a certain point. I would say stop rewarding the structure at 25-50% fewer Cytosines than Guanines. If an RNA has more Cytosines than Guanines, penalize it. Penalize the RNA more severely as that ratio increases. That is, the penalty for 25% more C than G is less harsh than the penalty for 100% more C than G.

I'd also like to see this strategy operate in reverse, if possible- that is, reward the RNA for when C>G and penalize it for when G>C.
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Posted 8 years ago

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Photo of Jeehyung Lee

Jeehyung Lee, Alum

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Dear, paramodic

Your strategy has been added to our implementation queue with task id 129. You can check the schedule of the implementation here.

Thanks for sharing your idea!

EteRNA team