LAB Shape: Branches - Identical Sequence Analysis

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  • Updated 8 years ago
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So well doing my first draft of results on our current lab shape.
Found a lot of re-occuring sequences, which isn't a bad thing.
Makes for very good comparisons

Anyways, below is a table for those of you so inclined of differences between the current scoring system based on similarity. And other designs to keep an eye on.
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Berex NZ

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Posted 8 years ago

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Jeehyung Lee, Alum

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Hello Berex,

This has been assigned task # 468 - we'll fix it before round 5 rewards are distributed.

Thanks for reporting!

EteRNA team
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Jeehyung Lee, Alum

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Hi Berex, this issue has been fixed - let us know if you find any other problem!

EteRNA team
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Berex NZ

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Followup, just looking at the revised.



Can you please confirm that Paul's design synthesis score was 76%, seems odd that he'd score identically to his previous?

The rest are scores I'm just wondering how the conclusion was reached.
tommy d design scores, should be 92?
wisdave should get 90 per each of his designs?
How did bacteriago get 76, down from 92?
JerryP70 went from 88 to 79?
iojp went from 95 to 88?

A clarification would be appreciated.

Thank you
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Jeehyung Lee, Alum

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Bonsai sampling turns out to be a glitch, as it's result is not out yet, but got scored by the closest design previously. I'm working on fixing it.

The rest is correct.

The closest synthesized design to tommyd's design is Eli Fisker's Branches which scored 76. Before, Branches Out 3 was scored 92 because it was only looking for the closest synthesized solution in the same round (round 2), but the fixed system look for the closest synthesized solution in every round. Same applies for the rest of the results
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Jeehyung Lee, Alum

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The glitch has been fixed

The Bonsai sampling v2 now gets 88, since it's closest synthesized design with result is Ding's Branches 6.

The Bonsai sampling has empty score, since it's result is not out yet. Its' bit weird that v2 got 88 despite being the same sequence, but again, we had to reward v2 something so the system took the score of Ding's Branches 6. I want to emphasize again that the closest solution scoring does not reflect the actual value of RNA, it is a rough heuristic we use to reward everyone for participating in the lab.